SOM cluster: 2182

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 196
Promoter: 26%
CpG-Island: 21%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 8.00141e-43
Factore-val(match)DB
SP10.00000010392JASPAR
RXR::RAR_DR50.0032637JASPAR
INSM10.0067143JASPAR
Klf40.0072357JASPAR
Egr10.01719JASPAR
Sites: 74/100 | e-val: 3.3e-17
Factore-val(match)DB
SP10.000000028346JASPAR
ESR10.00020129JASPAR
Klf40.00094581JASPAR
PPARG::RXRA0.0015082JASPAR
Tal1::Gata10.0026234JASPAR
Sites: 21/100 | e-val: 0.00035
Factore-val(match)DB
Klf40.0025199JASPAR
RXR::RAR_DR50.0034728JASPAR
EBF10.0044042JASPAR
Stat30.017735JASPAR
En10.018972JASPAR

BED file downloads

Download top of 196 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 49365085-49365235ARF347.82
chr12: 49365085-49365235KMT2D47.82
chr12: 49365085-49365235WNT10B47.82
chr12: 49365085-49365235RP11-386G11.347.82
chr11: 2949345-2949495KCNQ148.06
chr11: 2949345-2949495SLC22A18AS48.06
chr16: 87669805-87669955FLJ0010449.81
chr17: 76337620-76337770RN7SL236P50.81
chr9: 133320365-133320515snoU1356.58
chr19: 51338825-51338975C19orf4858.95
View top connections.

Other

CodePlot