SOM cluster: 2196

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 325
Promoter: 1%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.000000019
Factore-val(match)DB
AP10.000000000088805JASPAR
NFE2L20.0000000061752JASPAR
NFE2L1::MafG0.0047506JASPAR
PPARG0.0047636JASPAR
Foxa20.0099824JASPAR
Sites: 14/100 | e-val: 0.037
Factore-val(match)DB
TP530.0029751JASPAR
FOXD10.015673JASPAR
Tcfcp2l10.016157JASPAR
FOXO30.016717JASPAR
Foxq10.0242JASPAR

BED file downloads

Download top of 325 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151144720-151144870SEMA6C20.09
chr1: 151144720-151144870PIP5K1A20.09
chr13: 42600300-42600450RPS28P844.96
chr12: 28186600-28186750RP11-993B23.347.82
chr12: 28186600-28186750PTHLH47.82
chr12: 28186600-28186750CCDC9147.82
chr1: 152224780-152224930RPTN48.33
chr1: 152224780-152224930FLG-AS148.33
chr18: 3346120-3346270TGIF152.44
chr1: 209607060-209607210RP1-272L16.155.78
View top connections.

Other

CodePlot