SOM cluster: 2204

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1971
Promoter: 0%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 74/100 | e-val: 0.00000077
Factore-val(match)DB
Foxd30.0000021674JASPAR
SOX100.000040889JASPAR
Foxq10.00012073JASPAR
Lhx30.00063264JASPAR
FOXI10.0023106JASPAR

BED file downloads

Download top of 1971 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 146640940-146641090RP11-337C18.714.54
chr1: 149935380-149935530OTUD7B18.82
chr1: 82055960-82056110MED28P845.11
chr10: 29679000-29679150SVIL50.15
chr4: 128507800-128507950INTU50.76
chr11: 58390020-58390170CNTF52.33
chr11: 58390020-58390170ZFP91-CNTF52.33
chr11: 128444600-128444750RP11-264E20.152.68
chr7: 39742820-39742970YAE1D152.92
chr3: 138100620-138100770MRAS53.48
View top connections.

Other

CodePlot