SOM cluster: 2217

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 230
Promoter: 5%
CpG-Island: 1%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 78/100 | e-val: 0
Factore-val(match)DB
FEV0.0000000029372JASPAR
SPI10.0000000082219JASPAR
GABPA0.0000011466JASPAR
ELF50.0000097638JASPAR
ELK40.000019587JASPAR
Sites: 38/100 | e-val: 1.7e-18
Factore-val(match)DB
RREB10.0000000013297JASPAR
SP10.0000000067417JASPAR
Pax40.0000089667JASPAR
EWSR1-FLI10.00023142JASPAR
MZF1_5-130.0033006JASPAR

BED file downloads

Download top of 230 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 103431900-103432050ERCC536.45
chr13: 103431900-103432050TEX3036.45
chr9: 130790880-130791030RP11-203J24.848.77
chr9: 130790880-130791030NAIF148.77
chr3: 48694545-48694695UQCRC149.51
chr9: 35649665-35649815ARHGEF3956.24
chr9: 35649665-35649815TPM256.24
chr9: 35649665-35649815SIT156.24
chr9: 35649665-35649815RUSC256.24
chr9: 35649665-35649815CD7256.24
View top connections.

Other

CodePlot