SOM cluster: 2218

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 221
Promoter: 16%
CpG-Island: 1%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 78/100 | e-val: 0
Factore-val(match)DB
SPI10.0000000057994JASPAR
FEV0.000000018939JASPAR
GABPA0.0000043803JASPAR
ELK40.0000094738JASPAR
ELF50.000035885JASPAR
Sites: 47/100 | e-val: 3.4e-21
Factore-val(match)DB
SP10.00000046466JASPAR
RREB10.00063504JASPAR
PPARG::RXRA0.0017527JASPAR
Klf40.0026157JASPAR
Pax40.0035085JASPAR
Sites: 29/100 | e-val: 0.2
Factore-val(match)DB
SPIB0.00044704JASPAR
SP10.00064195JASPAR
INSM10.00071733JASPAR
Foxa20.039086JASPAR
FEV0.050643JASPAR

BED file downloads

Download top of 221 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 11268060-11268210CELF2-AS133.11
chr10: 11268060-11268210CELF233.11
chr17: 76382540-76382690PGS137.15
chr19: 10519540-10519690RAVER149.85
chr19: 10519540-10519690PDE4A49.85
chr19: 10519540-10519690ICAM349.85
chr19: 10519540-10519690TYK249.85
chr17: 80549620-80549770RAB40B53.14
chr17: 80549620-80549770WDR45B53.14
chr9: 134132265-134132415PPAPDC354.94
View top connections.

Other

CodePlot