SOM cluster: 2220

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 156
Promoter: 10%
CpG-Island: 3%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 64/100 | e-val: 0.0013
Factore-val(match)DB
IRF10.0019795JASPAR
NFATC20.0082845JASPAR
MEF2A0.012904JASPAR
Lhx30.026441JASPAR
HNF1A0.032984JASPAR

BED file downloads

Download top of 156 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150540500-150540650ADAMTSL413.02
chr10: 5670920-5671070RP13-463N16.630.05
chr10: 5670920-5671070RP11-336A10.230.05
chr10: 5670920-5671070RP11-336A10.730.05
chr10: 5670920-5671070RP11-336A10.530.05
chr3: 5025480-5025630BHLHE4041.92
chr3: 5025480-5025630BHLHE40-AS141.92
chr13: 42490685-42490835RPS28P848.01
chr6: 14877700-14877850RP11-146I2.148.97
chr12: 27332620-27332770STK38L50.84
View top connections.

Other

CodePlot