SOM cluster: 2230

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 15238
Promoter: 0%
CpG-Island: 0%
Conserved: 13%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.00000000000014
Factore-val(match)DB
Foxd30.0000000073985JASPAR
HNF1B0.00000016411JASPAR
Foxq10.0000030103JASPAR
HNF1A0.000019407JASPAR
Lhx30.000023099JASPAR

BED file downloads

Download top of 15238 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145435480-145435630GNRHR213.02
chr17: 17853780-17853930ATPAF226.32
chr1: 150927860-150928010ANXA932.56
chr8: 85159240-85159390RALYL36.25
chr8: 10678845-10678995RP11-177H2.237.01
chr1: 203840720-203840870RP11-397P13.641.86
chr1: 203840720-203840870CBX1P341.86
chr7: 140116460-140116610RAB1942.62
chr4: 89802200-89802350FAM13A42.73
chr7: 45909900-45910050AC096582.943.98
View top connections.

Other

CodePlot