SOM cluster: 226

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 359
Promoter: 2%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 5.30001e-40
Factore-val(match)DB
SPI10.000000020652JASPAR
SPIB0.0000020013JASPAR
FEV0.000067834JASPAR
GABPA0.00040581JASPAR
ELF50.00042738JASPAR
Sites: 11/100 | e-val: 0.096
Factore-val(match)DB
Tal1::Gata10.000043701JASPAR
Pax40.000072351JASPAR
SP10.00017658JASPAR
EWSR1-FLI10.00051581JASPAR
MZF1_1-40.0019719JASPAR

BED file downloads

Download top of 359 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 90406780-90406930LRRC8D32.79
chr7: 36824780-36824930ELMO142.35
chr4: 48229760-48229910TEC45.87
chr1: 117546260-117546410CD10146.13
chr13: 99934080-99934230GPR18346.62
chr13: 99934080-99934230GPR1846.62
chr12: 117115260-117115410RP11-497G19.147.04
chr1: 3594220-3594370TPRG1L49.76
chr1: 3594220-3594370RP5-1092A11.549.76
chr8: 12615200-12615350OR7E15P51.55
View top connections.

Other

CodePlot