SOM cluster: 2298

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1684
Promoter: 3%
CpG-Island: 0%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 4.4e-35
Factore-val(match)DB
TP530.000000000000011879JASPAR
Tcfcp2l10.000087064JASPAR
znf1430.0079682JASPAR
SRF0.017284JASPAR
RORA_10.030944JASPAR

BED file downloads

Download top of 1684 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 100619360-100619510SCYL232.76
chr2: 29289980-29290130AC105398.338.4
chr2: 29289980-29290130CLIP438.4
chr1: 95015380-95015530F345.53
chr12: 27746180-27746330RP11-709A23.146.66
chr4: 170152840-170152990RPL6P1246.77
chr5: 74636640-74636790HMGCR47.07
chr5: 74636640-74636790COL4A3BP47.07
chr17: 14680240-14680390AC005863.147.89
chr1: 161044920-161045070PVRL447.91
View top connections.

Other

CodePlot