SOM cluster: 230

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 175
Promoter: 49%
CpG-Island: 88%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.0000018741JASPAR
TFAP2A0.00046249JASPAR
Egr10.0074129JASPAR
PLAG10.01025JASPAR
Klf40.040262JASPAR
Sites: 94/100 | e-val: 0.0000000000093
Factore-val(match)DB
SP10.000006348JASPAR
TFAP2A0.0024881JASPAR
Klf40.0037843JASPAR
PLAG10.0056097JASPAR
EWSR1-FLI10.0059046JASPAR

BED file downloads

Download top of 175 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 132815885-132816035AL360004.144.52
chr16: 11350300-11350450RMI247.83
chr16: 11350300-11350450Y_RNA47.83
chr17: 58469160-58469310C17orf6450.23
chr19: 30336120-30336270CCNE154.31
chr17: 62971380-62971530GNA1362.15
chr7: 99933880-99934030STAG3L5P62.92
chr7: 99933880-99934030PILRB62.92
chr7: 99933880-99934030PVRIG2P62.92
chr14: 50779120-50779270ATP5S64.94
View top connections.

Other

CodePlot