SOM cluster: 2305

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 357
Promoter: 4%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.36
Factore-val(match)DB
Foxd30.00000043169JASPAR
Foxq10.0000009202JASPAR
HNF1A0.0000028058JASPAR
HNF1B0.000034333JASPAR
Pax40.000070072JASPAR

BED file downloads

Download top of 357 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 55389340-55389490SOX1738.14
chr8: 55389340-55389490RP11-53M11.338.14
chr8: 8701605-8701755MFHAS140.7
chr1: 151114360-151114510SEMA6C42.79
chrX: 106178480-106178630CLDN249.94
chr17: 27970520-27970670GIT157
chr17: 27970520-27970670SSH257
chr5: 72938240-72938390ARHGEF2859.14
chr5: 72234020-72234170CTC-250P20.259.34
chr5: 72234020-72234170CTC-250P20.159.34
View top connections.

Other

CodePlot