SOM cluster: 2322

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4315
Promoter: 0%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.034
Factore-val(match)DB
Lhx30.00000035377JASPAR
Prrx20.000072126JASPAR
ARID3A0.00011809JASPAR
Nkx2-50.0011741JASPAR
Pdx10.0020304JASPAR

BED file downloads

Download top of 4315 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149215200-149215350RP11-403I13.433.13
chr8: 9110420-9110570RP11-10A14.537.45
chr8: 9110420-9110570RP11-10A14.437.45
chr3: 186160080-186160230RP11-48F14.239.02
chr4: 88030420-88030570KLHL840.52
chr9: 72415540-72415690PTAR143.28
chr2: 25079860-25080010DNAJC2744.04
chr12: 121146660-121146810CABP146.78
chr11: 70038860-70039010RP11-805J14.347.35
chr2: 130919660-130919810AC018804.747.37
View top connections.

Other

CodePlot