SOM cluster: 2330

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 232
Promoter: 0%
CpG-Island: 0%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.000000000054
Factore-val(match)DB
FOXA10.00008368JASPAR
Pax40.00027533JASPAR
Foxa20.00043353JASPAR
Lhx30.0025058JASPAR
ARID3A0.0030425JASPAR

BED file downloads

Download top of 232 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr15: 77710220-77710370HMG20A57.2
chr18: 42420120-42420270SETBP160.06
chr16: 67497000-67497150HSD11B261.27
chr4: 39550380-39550530SMIM1464.35
chr4: 39550380-39550530UGDH-AS164.35
chr4: 39550380-39550530LIAS64.35
chr17: 67497120-67497270AC003051.168.64
chr13: 24777960-24778110SPATA1368.99
chr1: 78938900-78939050PTGFR69.33
chr10: 100840120-100840270HPSE271.04
View top connections.

Other

CodePlot