SOM cluster: 2343

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 97
Promoter: 36%
CpG-Island: 32%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/97 | e-val: 0.000036
Factore-val(match)DB
SP10.0000043537JASPAR
TFAP2A0.00030655JASPAR
Zfx0.00085106JASPAR
Klf40.0030516JASPAR
MZF1_1-40.008142JASPAR
Sites: 57/97 | e-val: 0.0000093
Factore-val(match)DB
SP10.00012663JASPAR
Pax40.0010536JASPAR
EWSR1-FLI10.042541JASPAR
TFAP2A0.042965JASPAR
MZF1_1-40.046855JASPAR
Sites: 23/97 | e-val: 2.3
Factore-val(match)DB
AP10.000000000094875JASPAR
NFE2L20.00000000013119JASPAR
Foxa20.0027639JASPAR
RORA_20.0028228JASPAR
PPARG0.0028819JASPAR

BED file downloads

Download top of 97 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 71357000-71357150MPHOSPH1045.53
chr2: 71357000-71357150PAIP2B45.53
chr9: 116327805-116327955RP11-168K11.258.5
chr1: 16481600-16481750RP11-276H7.261.48
chr3: 5068460-5068610BHLHE40-AS163.67
chr3: 5068460-5068610BHLHE4063.67
chr19: 19739720-19739870LPAR263.99
chr2: 242089540-242089690PPP1R766.88
chr2: 242089540-242089690PASK66.88
chr2: 242089540-242089690SNED166.88
View top connections.

Other

CodePlot