SOM cluster: 241

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 161
Promoter: 39%
CpG-Island: 74%
Conserved: 73%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
PLAG10.00000062615JASPAR
SP10.000002401JASPAR
TFAP2A0.0000095893JASPAR
Egr10.00051894JASPAR
Klf40.0044451JASPAR
Sites: 71/100 | e-val: 3.3e-27
Factore-val(match)DB
SP10.0000000010873JASPAR
PLAG10.000085814JASPAR
TFAP2A0.0044474JASPAR
RREB10.0074007JASPAR
Klf40.0193JASPAR

BED file downloads

Download top of 161 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 37465100-37465250POLR1E48.72
chr9: 37465100-37465250ZBTB548.72
chr12: 329140-329290RP11-283I3.249.64
chr19: 48672980-48673130LIG151.35
chr17: 76130540-76130690TNRC6C-AS151.56
chr17: 76130540-76130690TK151.56
chr17: 76130540-76130690BIRC551.56
chr17: 76130540-76130690AFMID51.56
chr17: 76130540-76130690SYNGR251.56
chr17: 76130540-76130690C17orf9951.56
View top connections.

Other

CodePlot