SOM cluster: 2453

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 216
Promoter: 25%
CpG-Island: 28%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 76/100 | e-val: 2.1e-22
Factore-val(match)DB
SP10.00000002614JASPAR
PPARG::RXRA0.00041682JASPAR
TP530.0025505JASPAR
PLAG10.0036565JASPAR
Pax40.0070789JASPAR
Sites: 29/100 | e-val: 0.073
Factore-val(match)DB
TP530.00028781JASPAR
PPARG::RXRA0.0008637JASPAR
Zfx0.0014403JASPAR
Tcfcp2l10.0044975JASPAR
HNF4A0.0083068JASPAR

BED file downloads

Download top of 216 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 122653760-122653910HAS234.62
chr8: 122653760-122653910HAS2-AS134.62
chr9: 132459925-132460075UBE2V1P439.84
chr9: 132459925-132460075RP11-483H20.439.84
chr1: 145054000-145054150SEC22B51.41
chr1: 145054000-145054150PDE4DIP51.41
chr17: 81057780-81057930B3GNTL157.5
chr17: 81057780-81057930METRNL57.5
chr14: 23307080-23307230SNORD4161.03
chr14: 23307080-23307230REM261.03
View top connections.

Other

CodePlot