SOM cluster: 2463

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 154
Promoter: 5%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.014
Factore-val(match)DB
IRF10.000036132JASPAR
SPIB0.000037973JASPAR
SPI10.00019391JASPAR
FEV0.00019589JASPAR
IRF20.00096418JASPAR

BED file downloads

Download top of 154 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 168994240-168994390ATP1B141.45
chr12: 6536200-6536350VAMP143.22
chr12: 6536200-6536350RP1-102E24.943.22
chr12: 6536200-6536350TAPBPL43.22
chr12: 6536200-6536350SCARNA1043.22
chr12: 6536200-6536350TNFRSF1A43.22
chr12: 6536200-6536350CD2743.22
chr12: 6536200-6536350LTBR43.22
chr12: 6536200-6536350CD27-AS143.22
chr6: 305980-306130IRF449.36
View top connections.

Other

CodePlot