SOM cluster: 265

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2424
Promoter: 1%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.0000000045
Factore-val(match)DB
IRF10.00011523JASPAR
Foxd30.0049483JASPAR
Foxq10.0092443JASPAR
IRF20.016079JASPAR
Pax40.023398JASPAR

BED file downloads

Download top of 2424 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 31739760-31739910RNU5F-4P26.53
chr3: 16424500-16424650RFTN130.88
chr9: 37836500-37836650TRMT10B32.06
chr9: 37836500-37836650RP11-613M10.932.06
chr3: 141047200-141047350ACPL234.2
chr1: 173376020-173376170RP11-296O14.337.84
chr1: 173376020-173376170PRDX637.84
chr5: 118730820-118730970TNFAIP839
chr1: 203269300-203269450NPM1P4041.8
chr1: 203269300-203269450BTG241.8
View top connections.

Other

CodePlot