SOM cluster: 282

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 196
Promoter: 46%
CpG-Island: 87%
Conserved: 62%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.000000002095JASPAR
Pax50.0020313JASPAR
Egr10.006552JASPAR
TFAP2A0.01209JASPAR
EWSR1-FLI10.02368JASPAR
Sites: 56/100 | e-val: 0.074
Factore-val(match)DB
GABPA0.000066232JASPAR
ELK40.000255JASPAR
SPIB0.003715JASPAR
SPI10.0087015JASPAR
SP10.010328JASPAR

BED file downloads

Download top of 196 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr14: 23772020-23772170BCL2L248.94
chr14: 23772020-23772170SLC22A1748.94
chr14: 23772020-23772170PPP1R3E48.94
chr14: 23772020-23772170PABPN148.94
chr14: 23772020-23772170EFS48.94
chr17: 62972120-62972270GNA1351.42
chr17: 62972120-62972270AMZ2P151.42
chr11: 73000480-73000630RELT54.04
chr13: 33002400-33002550BRCA255.06
chr13: 33002400-33002550SNORA1655.06
View top connections.

Other

CodePlot