SOM cluster: 312

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 120
Promoter: 11%
CpG-Island: 13%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 0.0000000000054
Factore-val(match)DB
SP10.00000007362JASPAR
EWSR1-FLI10.000019713JASPAR
Pax40.0094468JASPAR
RREB10.016212JASPAR
Myf0.017712JASPAR
Sites: 19/100 | e-val: 0.27
Factore-val(match)DB
FEV0.0000001773JASPAR
SPI10.00000098962JASPAR
Stat30.0000088174JASPAR
ELK40.000050933JASPAR
EWSR1-FLI10.000060602JASPAR

BED file downloads

Download top of 120 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 94101900-94102050FNBP1L48.28
chr1: 204034385-204034535LINC0030348.46
chr1: 204034385-204034535SOX1348.46
chr1: 204034385-204034535ETNK248.46
chr1: 26483320-26483470FAM110D51.45
chr19: 53934720-53934870ZNF81357.91
chr19: 53934720-53934870CTD-2224J9.757.91
chr19: 4390560-4390710UBXN664.42
chr19: 4390560-4390710MPND64.42
chrX: 138287160-138287310FGF1366.45
View top connections.

Other

CodePlot