SOM cluster: 315

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 328
Promoter: 31%
CpG-Island: 95%
Conserved: 68%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.000036674JASPAR
TFAP2A0.00072108JASPAR
PLAG10.017299JASPAR
Klf40.03318JASPAR
Zfx0.059301JASPAR
Sites: 74/100 | e-val: 0.0000000000000038
Factore-val(match)DB
SP10.000000053746JASPAR
TFAP2A0.00001333JASPAR
Egr10.000042074JASPAR
Klf40.024491JASPAR
INSM10.03977JASPAR

BED file downloads

Download top of 328 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 127770720-127770870SEC61A139.46
chr12: 109490520-109490670USP3049.42
chr12: 109490520-109490670USP30-AS149.42
chrX: 152989500-152989650PLXNB349.79
chr8: 71520280-71520430AC120194.151.52
chr5: 175395020-175395170RP11-826N14.151.63
chr5: 175395020-175395170RP11-826N14.251.63
chr5: 130500700-130500850HINT154.52
chr5: 130500700-130500850CDC42SE254.52
chr1: 198125825-198125975NEK754.94
View top connections.

Other

CodePlot