SOM cluster: 336

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 193
Promoter: 48%
CpG-Island: 89%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.00000012951JASPAR
TFAP2A0.00018293JASPAR
Klf40.00044256JASPAR
PLAG10.0049309JASPAR
Egr10.021703JASPAR
Sites: 83/100 | e-val: 0.0000000000036
Factore-val(match)DB
NHLH10.00082145JASPAR
SP10.0010804JASPAR
TFAP2A0.0039775JASPAR
Zfx0.0045373JASPAR
Myb0.026882JASPAR

BED file downloads

Download top of 193 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 7307140-7307290GPS248.99
chr17: 7307140-7307290KCTD1148.99
chr17: 7307140-7307290AC026954.648.99
chr12: 39299420-39299570CPNE852.1
chr12: 39299420-39299570RP11-396F22.152.1
chr2: 70313460-70313610PCBP1-AS152.75
chr3: 122399580-122399730PARP1455.48
chr3: 122399580-122399730EIF4BP855.48
chr6: 34394000-34394150RPS1055.98
chr13: 41635100-41635250ELF159.17
View top connections.

Other

CodePlot