SOM cluster: 340

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 129
Promoter: 48%
CpG-Island: 49%
Conserved: 78%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.0000000000031161JASPAR
Pax40.00021385JASPAR
Egr10.00030343JASPAR
PLAG10.0010182JASPAR
Klf40.0013857JASPAR

BED file downloads

Download top of 129 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 202777560-202777710RP11-480I12.427.81
chr1: 202777560-202777710RP11-480I12.527.81
chr8: 128748220-128748370MYC46.09
chr16: 30798465-30798615ZNF62954.41
chr16: 30798465-30798615SRCAP54.41
chr2: 120189240-120189390TMEM3756.98
chr3: 72937060-72937210GXYLT265.03
chr12: 107349200-107349350RIC8B65.87
chr14: 23447145-23447295REM268.16
chr14: 23447145-23447295PRMT5-AS168.16
View top connections.

Other

CodePlot