SOM cluster: 348

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 214
Promoter: 53%
CpG-Island: 56%
Conserved: 87%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.0000000013461JASPAR
TFAP2A0.00022042JASPAR
Egr10.00072791JASPAR
Klf40.0029253JASPAR
PLAG10.0031602JASPAR
Sites: 42/100 | e-val: 0.000028
Factore-val(match)DB
SP10.0017248JASPAR
PLAG10.008382JASPAR
EWSR1-FLI10.010229JASPAR
Zfp4230.021684JASPAR
Zfx0.027133JASPAR

BED file downloads

Download top of 214 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 28613100-28613250FOSL239.04
chr3: 61547100-61547250PTPRG45.72
chr9: 131495660-131495810VTI1BP448.6
chr9: 131495660-131495810PKN348.6
chr19: 52192240-52192390SIGLEC549.09
chr19: 52192240-52192390FPR249.09
chr19: 52192240-52192390MIRLET7E49.09
chr19: 52192240-52192390SIGLEC1449.09
chr1: 204042160-204042310SOX1349.3
chr1: 204042160-204042310ETNK249.3
View top connections.

Other

CodePlot