SOM cluster: 370

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 253
Promoter: 20%
CpG-Island: 22%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 1.79366e-43
Factore-val(match)DB
SP10.00000010765JASPAR
Pax40.00000056248JASPAR
RREB10.00000058011JASPAR
Klf40.0002514JASPAR
Egr10.022368JASPAR
Sites: 48/100 | e-val: 0.0000061
Factore-val(match)DB
Myf0.0004717JASPAR
EBF10.00069137JASPAR
Stat30.0021247JASPAR
REST0.003645JASPAR
Pax60.0059174JASPAR

BED file downloads

Download top of 253 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 130627540-130627690PIP5KL150.47
chr9: 130627540-130627690RP11-203J24.950.47
chr9: 130627540-130627690AK150.47
chr5: 149185785-149185935PPARGC1B53.87
chr8: 80695680-80695830HEY156.72
chr22: 37557520-37557670SSTR359.57
chr22: 37557520-37557670IL2RB59.57
chr22: 37557520-37557670Z82188.159.57
chr22: 37557520-37557670RAC259.57
chr22: 37557520-37557670C1QTNF659.57
View top connections.

Other

CodePlot