SOM cluster: 379

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 213
Promoter: 11%
CpG-Island: 1%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 34/100 | e-val: 0.0000000000000019
Factore-val(match)DB
SPI10.00000001454JASPAR
SPIB0.0000002941JASPAR
FEV0.000030314JASPAR
GABPA0.00018401JASPAR
ELF50.00022276JASPAR

BED file downloads

Download top of 213 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 156124005-156124155LMNA44.32
chr1: 156124005-156124155SEMA4A44.32
chr1: 156124005-156124155BGLAP44.32
chr13: 99987960-99988110GPR1853.78
chr13: 99987960-99988110GPR18353.78
chr10: 97549780-97549930ENTPD154.14
chr10: 97549780-97549930RP11-429G19.354.14
chr19: 17249420-17249570HAUS854.73
chr19: 17249420-17249570NR2F654.73
chr6: 31582200-31582350LST154.93
View top connections.

Other

CodePlot