SOM cluster: 388

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 217
Promoter: 34%
CpG-Island: 58%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 31/100 | e-val: 5.2e-33
Factore-val(match)DB
IRF20.000000000000040301JASPAR
IRF10.000000000000085265JASPAR
ELK40.00056373JASPAR
GABPA0.006338JASPAR
FOXA10.007613JASPAR
Sites: 53/100 | e-val: 0.00000000022
Factore-val(match)DB
SP10.00021198JASPAR
TFAP2A0.00045404JASPAR
Klf40.0048719JASPAR
Egr10.01721JASPAR
PLAG10.11265JASPAR

BED file downloads

Download top of 217 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 22919660-22919810PIP4K2A31.35
chr2: 30448080-30448230AC104698.150.62
chr2: 30448080-30448230LBH50.62
chr19: 54617920-54618070TMC452.3
chr19: 54617920-54618070TSEN3452.3
chr19: 54617920-54618070TFPT52.3
chr11: 47788180-47788330FNBP458.11
chr3: 36986500-36986650TRANK160.43
chr13: 41238400-41238550FOXO163.31
chr1: 207999120-207999270C1orf13264.05
View top connections.

Other

CodePlot