SOM cluster: 410

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 9166
Promoter: 5%
CpG-Island: 25%
Conserved: 34%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 2.8026e-45
Factore-val(match)DB
SP10.0000031463JASPAR
EWSR1-FLI10.00001066JASPAR
Egr10.0025224JASPAR
PPARG::RXRA0.0031227JASPAR
Klf40.0035547JASPAR
Sites: 57/100 | e-val: 0.00000000028
Factore-val(match)DB
PLAG10.000010108JASPAR
Klf40.00031584JASPAR
SP10.0003877JASPAR
NFKB10.002899JASPAR
TFAP2A0.008302JASPAR
Sites: 35/100 | e-val: 0.035
Factore-val(match)DB
EWSR1-FLI10.0000000454JASPAR
SP10.000000079133JASPAR
PLAG10.0000016533JASPAR
INSM10.0024723JASPAR
RXR::RAR_DR50.0028859JASPAR
Sites: 20/100 | e-val: 2.7
Factore-val(match)DB
SP10.000003189JASPAR
Pax40.00062186JASPAR
RREB10.00063789JASPAR
Klf40.0085913JASPAR
INSM10.016372JASPAR
Sites: 29/100 | e-val: 0.71
Factore-val(match)DB
Myf0.0000038189JASPAR
PLAG10.0078092JASPAR
NHLH10.0086524JASPAR
TFAP2A0.010901JASPAR
EBF10.017607JASPAR

BED file downloads

Download top of 9166 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 159831145-159831295CCDC1934.76
chr1: 159831145-159831295SLAMF934.76
chr15: 101903405-101903555VIMP35.31
chr3: 184077580-184077730CHRD38.19
chr8: 8174820-8174970FAM86B3P39.3
chr3: 127192425-127192575TPRA140.2
chr1: 53547505-53547655SLC1A742.07
chr1: 53547505-53547655SCP242.07
chr1: 227930785-227930935ZNF67842.58
chr4: 44427740-44427890KCTD843.46
View top connections.

Other

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