SOM cluster: 418

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2265
Promoter: 10%
CpG-Island: 2%
Conserved: 22%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 6.3e-18
Factore-val(match)DB
SP10.000000036276JASPAR
Pax40.0000008089JASPAR
Klf40.000034841JASPAR
RREB10.00010001JASPAR
PPARG::RXRA0.00026396JASPAR
Sites: 25/100 | e-val: 0.0028
Factore-val(match)DB
EWSR1-FLI10.00000010296JASPAR
SPI10.0092238JASPAR
SPIB0.013079JASPAR
SP10.014241JASPAR
Spz10.025687JASPAR
Sites: 14/100 | e-val: 2.4
Factore-val(match)DB
ESR10.00000000064268JASPAR
ESR20.0000000046148JASPAR
PPARG0.000016533JASPAR
NR4A20.000053795JASPAR
RREB10.0010876JASPAR

BED file downloads

Download top of 2265 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150460320-150460470ADAMTSL412.97
chr22: 39922265-39922415RP5-1104E15.635.24
chr17: 18085920-18086070TOP3A36.03
chr8: 6567180-6567330CTD-2541M15.140.41
chr19: 10477920-10478070RAVER141.29
chr19: 10477920-10478070ICAM341.29
chr19: 10477920-10478070TYK241.29
chr12: 120636220-120636370GCN1L141.53
chr12: 111126425-111126575HVCN142.88
chr12: 111126425-111126575TCTN142.88
View top connections.

Other

CodePlot