SOM cluster: 424

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 144
Promoter: 9%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 32/100 | e-val: 0.27
Factore-val(match)DB
Pou5f10.00000000025951JASPAR
Sox20.00000000029452JASPAR
HLF0.00000021128JASPAR
NFIL30.0000019171JASPAR
CEBPA0.000013582JASPAR

BED file downloads

Download top of 144 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 100777440-100777590LAMTOR353.65
chr6: 15063780-15063930RP1-190J20.256.16
chr3: 122043840-122043990CSTA61.98
chr8: 75059080-75059230JPH164.55
chr19: 18364640-18364790IFI3065.78
chr19: 18364640-18364790PDE4C65.78
chr19: 18364640-18364790PGPEP165.78
chr4: 1294900-1295050CTBP1-AS266.38
chr4: 1294900-1295050AC078852.266.38
chr3: 152928600-152928750RAP2B67.1
View top connections.

Other

CodePlot