SOM cluster: 434

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 280
Promoter: 41%
CpG-Island: 96%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.001854JASPAR
PLAG10.0038492JASPAR
SP10.024045JASPAR
Zfx0.049189JASPAR
Egr10.057644JASPAR
Sites: 94/100 | e-val: 1e-20
Factore-val(match)DB
SP10.00003317JASPAR
MIZF0.00082119JASPAR
Klf40.0043122JASPAR
TFAP2A0.01341JASPAR
Zfx0.014302JASPAR

BED file downloads

Download top of 280 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149764120-149764270HIST2H2AB25.44
chr1: 149764120-149764270RP11-196G18.325.44
chr18: 2655300-2655450NDC8053.08
chr11: 57509180-57509330YPEL456.57
chr11: 57509180-57509330C11orf3156.57
chr19: 21203640-21203790RNA5SP46957.62
chr1: 156595700-156595850ISG20L259.08
chr1: 156595700-156595850GPATCH459.08
chr1: 156595700-156595850HAPLN259.08
chr2: 65215660-65215810SLC1A459.28
View top connections.

Other

CodePlot