SOM cluster: 453

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 327
Promoter: 48%
CpG-Island: 84%
Conserved: 78%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 90/100 | e-val: 0
Factore-val(match)DB
SP10.00000030066JASPAR
TFAP2A0.00041595JASPAR
PLAG10.00097554JASPAR
Egr10.0034713JASPAR
Zfx0.027159JASPAR
Sites: 76/100 | e-val: 0
Factore-val(match)DB
SP10.000047139JASPAR
TFAP2A0.00032338JASPAR
PLAG10.0010573JASPAR
Klf40.01177JASPAR
E2F10.062809JASPAR

BED file downloads

Download top of 327 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 152907845-152907995PNCK46.19
chrX: 152907845-152907995DUSP946.19
chr19: 11909640-11909790ZNF43947.94
chr2: 160143660-160143810WDSUB149.39
chr2: 160143660-160143810TANC149.39
chr9: 127266965-127267115NR5A149.87
chrX: 48693980-48694130PCSK1N49.93
chrX: 48693980-48694130TIMM17B49.93
chr19: 33716685-33716835SLC7A1051.45
chr18: 55253525-55253675ATP8B154.69
View top connections.

Other

CodePlot