SOM cluster: 463

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 255
Promoter: 9%
CpG-Island: 1%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 1.5e-17
Factore-val(match)DB
IRF10.000000001791JASPAR
IRF20.000000363JASPAR
FOXA10.01281JASPAR
NR1H2::RXRA0.022587JASPAR
NFATC20.024144JASPAR

BED file downloads

Download top of 255 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 171579620-171579770PFN1P149.66
chr17: 27876300-27876450GIT149.77
chr17: 27876300-27876450ANKRD13B49.77
chr2: 71292080-71292230MCEE51.3
chr2: 71292080-71292230OR7E62P51.3
chr4: 47841340-47841490CORIN52.06
chr8: 11337560-11337710RP11-148O21.352.21
chr8: 11337560-11337710FAM167A52.21
chr9: 130835060-130835210LCN255.15
chr17: 47818460-47818610RP11-613C6.259.37
View top connections.

Other

CodePlot