SOM cluster: 5

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 330
Promoter: 10%
CpG-Island: 18%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 73/100 | e-val: 0
Factore-val(match)DB
SP10.000000000036271JASPAR
Pax40.0000063078JASPAR
Klf40.000011754JASPAR
RREB10.00015126JASPAR
Egr10.00032129JASPAR

BED file downloads

Download top of 330 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 22623380-22623530COMMD325.07
chr10: 22623380-22623530BMI125.07
chr8: 141450760-141450910CASC747.01
chr8: 141450760-141450910TRAPPC947.01
chr22: 36855540-36855690RP5-1119A7.1449.44
chr5: 159693880-159694030CCNJL54.3
chr19: 11536680-11536830CCDC15954.31
chr19: 11536680-11536830RGL354.31
chr1: 182669200-182669350RGS854.57
chr9: 133892560-133892710AIF1L65.64
View top connections.

Other

CodePlot