SOM cluster: 543

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 181
Promoter: 1%
CpG-Island: 0%
Conserved: 65%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.000012
Factore-val(match)DB
Foxd30.00043622JASPAR
Foxq10.00080584JASPAR
Pax40.0010382JASPAR
IRF10.0066245JASPAR
SRY0.014943JASPAR

BED file downloads

Download top of 181 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 94091220-94091370RP5-1033H22.231.79
chr8: 121869840-121869990SNTB133.7
chr8: 17468425-17468575RP11-326L2.138.22
chr8: 17468425-17468575PDGFRL38.22
chr3: 158189500-158189650RSRC143.86
chr12: 120637800-120637950GCN1L145.23
chr12: 120637800-120637950PXN-AS145.23
chr7: 65210760-65210910CCT6P153.62
chr5: 148591820-148591970ABLIM360.07
chr4: 124282720-124282870SPRY163.35
View top connections.

Other

CodePlot