SOM cluster: 573

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 164
Promoter: 7%
CpG-Island: 0%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.0022
Factore-val(match)DB
Foxd30.0051618JASPAR
Foxq10.0066693JASPAR
Lhx30.0074509JASPAR
IRF10.020591JASPAR
Nkx2-50.022529JASPAR

BED file downloads

Download top of 164 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 130595980-130596130ENG36.87
chr8: 42775280-42775430THAP147.23
chr8: 42775280-42775430HOOK347.23
chr1: 153957760-153957910NUP210L47.94
chr1: 153957760-153957910CREB3L447.94
chr1: 153957760-153957910RAB1347.94
chr16: 90098565-90098715AFG3L1P51.62
chr4: 39715480-39715630SMIM1459.37
chr12: 6658160-6658310RP1-102E24.661.53
chr12: 6658160-6658310IFFO161.53
View top connections.

Other

CodePlot