SOM cluster: 582

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1368
Promoter: 5%
CpG-Island: 0%
Conserved: 19%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 90/100 | e-val: 1.1e-28
Factore-val(match)DB
SP10.00000005118JASPAR
ESR10.00029846JASPAR
PPARG::RXRA0.0012636JASPAR
Tal1::Gata10.0013721JASPAR
Pax40.0024513JASPAR
Sites: 38/100 | e-val: 0.00000075
Factore-val(match)DB
NFKB10.00068999JASPAR
Myf0.00087855JASPAR
NF-kappaB0.0057772JASPAR
REST0.00962JASPAR
TFAP2A0.0098842JASPAR
Sites: 45/100 | e-val: 0.0000067
Factore-val(match)DB
EBF10.0000013311JASPAR
PLAG10.00001924JASPAR
INSM10.00034562JASPAR
Zfp4230.00049718JASPAR
TFAP2A0.0019829JASPAR
Sites: 32/100 | e-val: 0.81
Factore-val(match)DB
PPARG::RXRA0.000074229JASPAR
EWSR1-FLI10.0002615JASPAR
SPI10.00028309JASPAR
Tal1::Gata10.00044469JASPAR
SP10.00077848JASPAR

BED file downloads

Download top of 1368 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 132336805-132336955PUS121.65
chr12: 109024920-109025070SART340.4
chr19: 13177160-13177310TRMT143.29
chr19: 13177160-13177310LYL143.29
chr19: 10805560-10805710ILF343.93
chr19: 10805560-10805710QTRT143.93
chr7: 117825400-117825550NAA3844.48
chr22: 19706885-19707035GNB1L45.12
chr7: 148926660-148926810ZNF21245.37
chr7: 148926660-148926810ZNF28245.37
View top connections.

Other

CodePlot