SOM cluster: 595

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 187
Promoter: 2%
CpG-Island: 0%
Conserved: 72%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 2.3
Factore-val(match)DB
FOXI10.00031563JASPAR
ARID3A0.00058074JASPAR
Lhx30.00091372JASPAR
NFATC20.0011812JASPAR
Foxq10.0014715JASPAR
Sites: 23/100 | e-val: 1.7
Factore-val(match)DB
HNF1A0.000037383JASPAR
Foxd30.00023122JASPAR
HNF1B0.00073788JASPAR
SRY0.0090669JASPAR
FOXI10.0091794JASPAR

BED file downloads

Download top of 187 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 77980240-77980390AK532.51
chr12: 96031360-96031510NTN451.83
chr12: 96031360-96031510USP4451.83
chr8: 49343160-49343310RP11-567J20.353.94
chr8: 118743140-118743290EXT154.72
chr3: 194931460-194931610XXYLT154.98
chr8: 89310780-89310930RP11-586K2.157.61
chr13: 42219600-42219750VWA858.7
chr3: 174667400-174667550NAALADL261.29
chr12: 93396580-93396730RP11-511B23.161.37
View top connections.

Other

CodePlot