SOM cluster: 597

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 226
Promoter: 5%
CpG-Island: 0%
Conserved: 72%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 0.0000000016
Factore-val(match)DB
TEAD10.000001435JASPAR
RELA0.0000046638JASPAR
NF-kappaB0.0000080884JASPAR
REL0.00013077JASPAR
Stat30.00057624JASPAR

BED file downloads

Download top of 226 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92295880-92296030TGFBR322.87
chr1: 78471520-78471670DNAJB434.8
chr1: 78471520-78471670FUBP134.8
chr1: 78471520-78471670NEXN34.8
chr1: 183149520-183149670LAMC141.91
chr1: 183149520-183149670RP11-548N1.141.91
chr1: 41568040-41568190SCMH144.98
chr1: 41568040-41568190SLFNL144.98
chr1: 41568040-41568190CTPS144.98
chr1: 67029240-67029390SGIP145.48
View top connections.

Other

CodePlot