SOM cluster: 601

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 329
Promoter: 41%
CpG-Island: 86%
Conserved: 63%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 91/100 | e-val: 0
Factore-val(match)DB
SP10.00000028988JASPAR
Egr10.00073052JASPAR
PLAG10.001719JASPAR
TFAP2A0.0027756JASPAR
Klf40.0032083JASPAR
Sites: 76/100 | e-val: 0
Factore-val(match)DB
SP10.00000008167JASPAR
TFAP2A0.00099537JASPAR
Klf40.0030625JASPAR
Egr10.012385JASPAR
PLAG10.026878JASPAR
Sites: 56/100 | e-val: 0.0011
Factore-val(match)DB
SP10.00042606JASPAR
Zfx0.00057238JASPAR
TFAP2A0.0041048JASPAR
Egr10.030308JASPAR
PLAG10.088414JASPAR

BED file downloads

Download top of 329 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 175970120-175970270EIF4E1B39.76
chr5: 175970120-175970270RNF4439.76
chr16: 89258780-89258930CDH1545.45
chr1: 161088040-161088190ADAMTS448.83
chr3: 27763160-27763310EOMES51.5
chr3: 27763160-27763310AC098973.251.5
chr12: 104532240-104532390TXNRD151.54
chr12: 104532240-104532390HCFC251.54
chr12: 104532240-104532390GLT8D251.54
chr1: 202777405-202777555RP11-480I12.551.86
View top connections.

Other

CodePlot