SOM cluster: 656

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 278
Promoter: 41%
CpG-Island: 77%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.0000000026439JASPAR
Klf40.00027244JASPAR
Egr10.00092579JASPAR
TFAP2A0.0018121JASPAR
RREB10.0068049JASPAR
Sites: 74/100 | e-val: 0.0000000091
Factore-val(match)DB
SP10.00000009522JASPAR
Klf40.0019005JASPAR
MZF1_1-40.0025772JASPAR
RXR::RAR_DR50.003133JASPAR
MZF1_5-130.0051915JASPAR

BED file downloads

Download top of 278 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145473005-145473155RBM8A12.95
chr1: 151372165-151372315RFX532.38
chr1: 151372165-151372315RP11-126K1.832.38
chr13: 45563265-45563415NUFIP138.04
chr1: 150981140-150981290PRUNE39.74
chr1: 150981140-150981290SETDB139.74
chr1: 150981140-150981290CDC42SE139.74
chr22: 36850825-36850975EIF3D42.19
chr22: 36850825-36850975RP5-1119A7.1442.19
chr9: 131902720-131902870IER5L44.49
View top connections.

Other

CodePlot