SOM cluster: 700

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 137
Promoter: 13%
CpG-Island: 3%
Conserved: 75%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 78/100 | e-val: 0
Factore-val(match)DB
NFE2L20.00000000000019962JASPAR
AP10.00000000057369JASPAR
NFE2L1::MafG0.0011005JASPAR
Pax20.0024002JASPAR
PPARG0.00304JASPAR
Sites: 35/100 | e-val: 0.000000000000043
Factore-val(match)DB
EWSR1-FLI10.00000000028024JASPAR
SP10.000033629JASPAR
Pax40.00046019JASPAR
MZF1_5-130.0020564JASPAR
SPI10.0090811JASPAR

BED file downloads

Download top of 137 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151512160-151512310TUFT142.49
chr9: 130324240-130324390STXBP143.5
chr9: 130324240-130324390LRSAM143.5
chr1: 203643380-203643530ATP2B456.33
chr1: 203643380-203643530SNORA7756.33
chr1: 8933720-8933870RNU6-304P58.37
chr3: 146262600-146262750PLSCR161.87
chr2: 55278380-55278530RTN462.04
chr2: 55278380-55278530RNU6-433P62.04
chr2: 55278380-55278530EML662.04
View top connections.

Other

CodePlot