SOM cluster: 705

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 711
Promoter: 10%
CpG-Island: 2%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 88/100 | e-val: 2e-21
Factore-val(match)DB
Pax40.000046853JASPAR
INSM10.000068454JASPAR
PLAG10.00010048JASPAR
SP10.00042617JASPAR
RREB10.00056934JASPAR
Sites: 24/100 | e-val: 0.000012
Factore-val(match)DB
SP10.00000067301JASPAR
PLAG10.0015713JASPAR
MZF1_5-130.0028814JASPAR
Zfp4230.00478JASPAR
CTCF0.005427JASPAR
Sites: 14/100 | e-val: 0.33
Factore-val(match)DB
Stat30.011047JASPAR
NFIC0.017529JASPAR
E2F10.01993JASPAR
EBF10.029187JASPAR
NFE2L20.047522JASPAR

BED file downloads

Download top of 711 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 127534640-127534790RPL3541.02
chr9: 127534640-127534790MIR181A241.02
chr6: 36804305-36804455PPIL142.55
chr11: 75087400-75087550RPS347.76
chr11: 75087400-75087550SNORD15A47.76
chr16: 87523185-87523335ZCCHC1450.9
chr17: 74028525-74028675GALR251.2
chr17: 74028525-74028675EXOC751.2
chr8: 143837425-143837575SLURP151.26
chr11: 69923965-69924115ANO153.07
View top connections.

Other

CodePlot