SOM cluster: 78

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 327
Promoter: 11%
CpG-Island: 0%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.1e-26
Factore-val(match)DB
FEV0.00000000012848JASPAR
SPI10.0000000045844JASPAR
ELK40.000000013381JASPAR
ELF50.0000038537JASPAR
SPIB0.000008705JASPAR

BED file downloads

Download top of 327 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 6656585-6656735RP11-732A19.947.26
chr11: 6656585-6656735TPP147.26
chr11: 6656585-6656735DCHS147.26
chr2: 26183900-26184050KIF3C52.43
chr13: 110993320-110993470COL4A152.76
chr13: 110993320-110993470snoU1352.76
chr13: 110993320-110993470COL4A252.76
chr2: 163175420-163175570FAP55.91
chr2: 163175420-163175570IFIH155.91
chr12: 113344580-113344730OAS357.65
View top connections.

Other

CodePlot