SOM cluster: 84

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 774
Promoter: 53%
CpG-Island: 80%
Conserved: 83%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 93/100 | e-val: 0
Factore-val(match)DB
SP10.00000047263JASPAR
TFAP2A0.0000041596JASPAR
CTCF0.0031787JASPAR
INSM10.0049017JASPAR
Klf40.0062536JASPAR
Sites: 77/100 | e-val: 9.80909e-45
Factore-val(match)DB
TFAP2A0.00015464JASPAR
PLAG10.00029074JASPAR
SP10.0054098JASPAR
NHLH10.0098835JASPAR
Klf40.01649JASPAR

BED file downloads

Download top of 774 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151020160-151020310BNIPL15.02
chr1: 151020160-151020310RP11-316M1.1215.02
chr3: 155524060-155524210GMPS45.12
chr8: 144680425-144680575RP11-661A12.545.9
chr11: 64655480-64655630MIR19246.01
chr5: 784860-785010ZDHHC1147.35
chr4: 89514200-89514350RN7SKP24447.39
chr13: 99097700-99097850FARP1-AS147.43
chr17: 62658300-62658450SMURF247.72
chrX: 48367245-48367395PORCN48.44
View top connections.

Other

CodePlot