SOM cluster: 905

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4884
Promoter: 7%
CpG-Island: 11%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 4.49957e-42
Factore-val(match)DB
RREB10.000000076465JASPAR
SP10.00011541JASPAR
PLAG10.00020282JASPAR
Pax40.0021735JASPAR
INSM10.0050145JASPAR
Sites: 41/100 | e-val: 0.000084
Factore-val(match)DB
SP10.00000028955JASPAR
PLAG10.0065354JASPAR
TFAP2A0.011323JASPAR
Zfp4230.023271JASPAR
MZF1_5-130.026732JASPAR

BED file downloads

Download top of 4884 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151261525-151261675RP11-126K1.216.04
chr1: 151118125-151118275SEMA6C34.51
chr1: 151118125-151118275GABPB234.51
chr1: 151118125-151118275MLLT1134.51
chr12: 57522545-57522695NXPH435.62
chr8: 10916745-10916895AF131215.336.9
chr8: 10916745-10916895AF131215.236.9
chr3: 134086525-134086675HMGB3P1339.52
chr2: 72360685-72360835CYP26B142.83
chr9: 139437665-139437815C9orf16343.12
View top connections.

Other

CodePlot