SOM cluster: 909

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 352
Promoter: 7%
CpG-Island: 4%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 33/100 | e-val: 0.000000000000026
Factore-val(match)DB
NR2F10.000000000000033418JASPAR
NR1H2::RXRA0.000000000014492JASPAR
HNF4A0.0000000017667JASPAR
PPARG::RXRA0.00000027171JASPAR
SOX100.012673JASPAR
Sites: 23/100 | e-val: 2.3
Factore-val(match)DB
Foxd30.0019527JASPAR
FOXO30.0033829JASPAR
FOXF20.0037868JASPAR
NR1H2::RXRA0.0054585JASPAR
NFATC20.0069204JASPAR

BED file downloads

Download top of 352 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 146640280-146640430PRKAB225.43
chr17: 1970040-1970190AC099684.135.61
chr9: 104207820-104207970TRMT112P440.41
chr1: 15516200-15516350TMEM5151.4
chr2: 133197480-133197630GPR3953.99
chr17: 63512300-63512450AXIN261.47
chr12: 122296725-122296875RP11-7M8.266.86
chr12: 122296725-122296875HPD66.86
chr22: 41953760-41953910CSDC268.28
chr22: 41953760-41953910XRCC668.28
View top connections.

Other

CodePlot