SOM cluster: 952

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 290
Promoter: 42%
CpG-Island: 83%
Conserved: 75%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.00006069JASPAR
TFAP2A0.0005047JASPAR
Egr10.041701JASPAR
MZF1_1-40.052151JASPAR
PLAG10.057355JASPAR
Sites: 92/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00002019JASPAR
SP10.000085929JASPAR
PLAG10.0087641JASPAR
RREB10.012917JASPAR
NHLH10.038116JASPAR
Sites: 58/100 | e-val: 0.0000000000001
Factore-val(match)DB
SP10.000000098535JASPAR
TFAP2A0.0016534JASPAR
PLAG10.0017965JASPAR
EWSR1-FLI10.0051738JASPAR
MZF1_1-40.012697JASPAR

BED file downloads

Download top of 290 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr16: 850685-850835LMF143.45
chr8: 10588365-10588515CTD-2135J3.346.71
chr1: 156830285-156830435NTRK148.73
chr1: 156830285-156830435PRCC48.73
chr1: 156830285-156830435PEAR148.73
chr12: 6809525-6809675PIANP51.56
chr4: 184719065-184719215STOX252.18
chr8: 41503945-41504095NKX6-358.46
chr11: 17756760-17756910KCNC164.66
chr6: 6003960-6004110NRN164.73
View top connections.

Other

CodePlot