SOM cluster: 979

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 6934
Promoter: 5%
CpG-Island: 0%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.00064
Factore-val(match)DB
Foxd30.0000055223JASPAR
Lhx30.0057487JASPAR
Foxq10.0076325JASPAR
FOXI10.0084525JASPAR
NR3C10.016974JASPAR
Sites: 15/100 | e-val: 1.3
Factore-val(match)DB
IRF10.0014518JASPAR
FEV0.0038714JASPAR
IRF20.0048782JASPAR
SPIB0.0088565JASPAR
Tal1::Gata10.023951JASPAR

BED file downloads

Download top of 6934 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 65887700-65887850LEPR28.86
chr19: 34796540-34796690GPI31.86
chr1: 150390040-150390190LINC0056832.4
chr3: 128275080-128275230RP11-475N22.437.98
chr3: 171927405-171927555RN7SL141P39.81
chr1: 78475060-78475210RP11-386I14.340.55
chr1: 78475060-78475210RP11-386I14.240.55
chr1: 78475060-78475210GIPC240.55
chr1: 78475060-78475210DNAJB440.55
chr8: 16854860-16855010FGF2041.54
View top connections.

Other

CodePlot