SOM cluster: 1022

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 436
Promoter: 18%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 54/100 | e-val: 6.3e-21
Factore-val(match)DB
HNF4A0.0000000000000031086JASPAR
NR2F10.00000000023043JASPAR
PPARG::RXRA0.0000018443JASPAR
NR1H2::RXRA0.0000091556JASPAR
NFIC0.00070857JASPAR
Sites: 37/100 | e-val: 0.000000065
Factore-val(match)DB
SP10.000048416JASPAR
Myf0.00089742JASPAR
Tal1::Gata10.0023387JASPAR
Klf40.0027698JASPAR
RXR::RAR_DR50.0029375JASPAR
Sites: 19/100 | e-val: 0.00017
Factore-val(match)DB
EWSR1-FLI10.00000000000050238JASPAR
SP10.0000038335JASPAR
Pax40.000074487JASPAR
znf1430.00041376JASPAR
RREB10.0033264JASPAR

BED file downloads

Download top of 436 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr21: 47575480-47575630FTCD48.11
chr11: 2003620-2003770MRPL23-AS151.62
chr1: 1103245-1103395MIR200A54.96
chr1: 1103245-1103395RNF22354.96
chr1: 161193380-161193530MPZ56.33
chr1: 161193380-161193530NR1I356.33
chr1: 161193380-161193530APOA256.33
chr9: 34630460-34630610ARID3C60.73
chr9: 34630460-34630610GALT60.73
chr11: 118979725-118979875HYOU161.01
View top connections.

Other

CodePlot